Selected Publications

Selected Publications of Students and Alumni

Arboleda, Valerie - 2012 - Mutations in the PCNA-binding domain of CDKN1C cause IMAGe syndrome

Bondhus, Leroy - Balancing the transcriptome: leveraging sample similarity to improve measures of gene specificity

Bondhus, Leroy - DMRscaler: a scale-aware method to identify regions of differential DNA methylation spanning basepair to multi-megabase features

Chen, Daniel - 2003 - Accommodating chromosome inversions in linkage analysis

Clark, Michael - 2010 - The genomic sequence of a cytogenetically aberrant human cancer cell line

Doss, Sudheer - 2006 - Cis-acting expression quantitative trait loci in mice

Durvasula, Arun - 2021 - Recovering signals of ghost archaic introgression in African populations

Durvasula, Arun - 2021 - A statistical model for reference-free inference of archaic local ancestry

Durvasula, Arun - 2021 - Negative selection on complex traits limits genetic risk prediction accuracy between populations

Fouse, Shun - 2008 - Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation

He, Huanhuan (Mahsa) - 2013 - Endothelial cells provide an instructive niche for the differentiation and functional polarization of M2-like macrophages

Kuraishy, Ali - 2007 - TORC2 regulates germinal center repression of the TCL1 oncoprotein to promote B cell development and inhibit transformation

Kustahivich, Vlad - 2003 - Transmission disequilibrium testing of dopamine-related candidate gene polymorphisms in ADHD: confirmation of association of ADHD with DRD4 and DRD5

Nazarian, Ramin - 2007 - Biogenesis of lysosome-related organelles complex 3 (BLOC-3): a complex containing the Hermansky-Pudlak syndrome (HPS) proteins HPS1 and HPS4

Orozco, Luz - 2011 - Unraveling inflammatory responses using systems genetics and gene-environment interactions in macrophages

Palafox, Maria - 2022 - From Chemoproteomic-Detected Amino Acids to Genomic Coordinates: Insights into Precise Multi-omic Data Integration

Phan, Jack - 2004 - Lipin, a lipodystrophy and obesity gene

Plasisier, Christopher - 2009 - A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia

Romanoski, Casey - 2010 - Systems genetics analysis of gene-by-environment interactions in human cells

Shen, Yin - 2008 - X-inactivation in female human embryonic stem cells is in a nonrandom pattern and prone to epigenetic alterations

Stone, Jennifer - 2006 - Evidence for sex-specific risk alleles in autism spectrum disorder

Strom, Samuel - 2010 - High-density SNP association study of the 17q21 chromosomal region linked to autism identifies CACNA1G as a novel candidate gene

Taylor, Paige - 2015 - Mutations in DYNC2LI1 disrupt cilia function and cause short rib polydactyly syndrome

Weissglas-Voldkov, Daphan - 2009 - The N342S MYLIP polymorphism is associated with high total cholesterol and increased LDL receptor degradation in humans